PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.5G394700.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 539aa    MW: 58030.2 Da    PI: 6.7327
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.5G394700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.83.5e-11229258433
                         XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLee 33 
                          k err+++NReAAr+sR+RKka++++Le+
  Sevir.5G394700.1.p 229 AKTERRLAQNREAARKSRLRKKAYVQQLET 258
                         799*************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.6E-8226302IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.243228272IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.3E-7228272No hitNo description
PfamPF001704.9E-8229259IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.88E-7230273No hitNo description
PROSITE patternPS000360233248IPR004827Basic-leucine zipper domain
PfamPF141443.8E-28311384IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 539 aa     Download sequence    Send to blast
MVHGEESSWR MERAALPLNQ ALAYGVQAHA AAAAAPPSCF LDFQPAAAAA AYFGFGELEE  60
ALIHGGGGAS ANAGGGVDPG VIIKSDAPAQ TKPAAAGYLA GAGGGRPPTL EIFPSWPMRH  120
QQQLHSGNSQ SVGSTTDSSS AQNTMSQMEL VSPASPAPRQ EVMMVTTDDY SYKPGLAAAP  180
AAAPAPAPPS FQQHHPALPL HLHGGGGGGG DHDKRKQGST RKDGKLVDAK TERRLAQNRE  240
AARKSRLRKK AYVQQLETSR IRLQQVEHEL QRARSQGLFV GGCSAAGDMS SGAAAFDMEY  300
ARWLDDDGKR LAELRGGLQA HLDGNLGLIV EECVQHYDEL FQLKAALAHE DVFHLLTGGW  360
ATPAERCFFW MGGFRPSELL KILIPQLDPL TEQQLLGICN LQQSSEQAEE ALAQGLHQLH  420
QSLADTVAAG TLNDGAAAPN YMSLMAVALE KLASLESFYQ QADNLRQQTL HQMRRILTTR  480
QAARCFLSIG EYYRRLRALS NLWASRPREN FIGTESLSPT ATELQVMHQQ QQNQFSGF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF0369490.0AF036949.1 Zea mays basic leucine zipper protein (liguleless2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004970651.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X1
SwissprotP239231e-116HBP1B_WHEAT; Transcription factor HBP-1b(c38)
SwissprotQ415581e-116HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLK3XGD50.0K3XGD5_SETIT; Uncharacterized protein
STRINGSi000955m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38093166
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.21e-134bZIP family protein